Data mining for important amino acid residues in multiple sequence alignments and protein structures:
Gespeichert in:
Beteilige Person: | |
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Format: | Hochschulschrift/Dissertation Buch |
Sprache: | Englisch |
Veröffentlicht: |
2014
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Schlagwörter: | |
Links: | http://epub.uni-regensburg.de/29907/ https://nbn-resolving.org/urn:nbn:de:bvb:355-epub-299076 http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=027292326&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
Umfang: | VIII, 129 S. Ill., graph. Darst. |
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Datensatz im Suchindex
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adam_text | DATA MINING FOR IMPORTANT AMINO
ACID RESIDUES IN MULTIPLE
SEQUENCE ALIGNMENTS AND PROTEIN
STRUCTURES
DISSERTATION
ZUR ERLANGUNG DES DOKTORGRADES DER
NATURWISSENSCHAFTEN (DR. RER. NAT.) DER
FAKULTAT FUR BIOLOGIE UND VORKLINISCHE MEDIZIN
DER UNIVERSITAT REGENSBURG
VORGELEGT VON
JAN-OLIVER JANDA
AUS LINZ, OSTERREICH
IM JAHR 2014
HTTP://D-NB.INFO/1052155294
CONTENTS
LIST OF FIGURES III
LIST OF TABLES V
ABBREVIATIONS VII
ABSTRACT 1
ZUSAMMENFASSUNG 3
1 INTRODUCTION 5
1.1 PROTEINS AND ENZYMES 5
1.2 MACHINE LEARNING 9
1.3 PROTEIN STRUCTURES 12
1.4 MULTIPLE SEQUENCE ALIGNMENTS 14
1.5 AIM OF THIS WORK 19
2 SUMMARY AND DISCUSSION 21
2.1 CLASSIFICATION OF HIGHLY CONSERVED RESIDUE POSITIONS 21
2.1.1 CLIPS-ID: A SOLELY SEQUENCE-BASED CLASSIFIER 22
2.1.2 CLIPS-3D: A SOLELY STRUCTURE-BASED CLASSIFIER 28
2.1.3 CLIPS-4D: A SEQUENCE- AND STRUCTURE-BASED CLASSIFIER ... 29
2.2 IDENTIFICATION OF CORRELATED MUTATIONS 34
CONTENTS
2.2.1 STATISTICAL ANALYSIS 35
2.2.2 CASE STUDIES THAT ILLUSTRATE CLASSIFICATION PERFORMANCE ... 37
3 BIBLIOGRAPHY 43
4 LIST OF PUBLICATIONS AND PERSONAL CONTRIBUTION 67
5 PUBLICATIONS 69
5.1 PUBLICATION A 69
5.2 PUBLICATION B 81
5.3 PUBLICATION C 115
6 ACKNOWLEDGEMENT 129
II
|
any_adam_object | 1 |
author | Janda, Jan-Oliver |
author_facet | Janda, Jan-Oliver |
author_role | aut |
author_sort | Janda, Jan-Oliver |
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bvnumber | BV041847791 |
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collection | ebook |
ctrlnum | (OCoLC)880530659 (DE-599)BVBBV041847791 |
dewey-full | 570 |
dewey-hundreds | 500 - Natural sciences and mathematics |
dewey-ones | 570 - Biology |
dewey-raw | 570 |
dewey-search | 570 |
dewey-sort | 3570 |
dewey-tens | 570 - Biology |
discipline | Biologie |
format | Thesis Book |
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spellingShingle | Janda, Jan-Oliver Data mining for important amino acid residues in multiple sequence alignments and protein structures Aminosäuren (DE-588)4142205-3 gnd Enzym (DE-588)4014988-2 gnd Strukturaufklärung (DE-588)4183788-5 gnd Molekulare Bioinformatik (DE-588)4531334-9 gnd |
subject_GND | (DE-588)4142205-3 (DE-588)4014988-2 (DE-588)4183788-5 (DE-588)4531334-9 (DE-588)4113937-9 |
title | Data mining for important amino acid residues in multiple sequence alignments and protein structures |
title_auth | Data mining for important amino acid residues in multiple sequence alignments and protein structures |
title_exact_search | Data mining for important amino acid residues in multiple sequence alignments and protein structures |
title_full | Data mining for important amino acid residues in multiple sequence alignments and protein structures von Jan-Oliver Janda |
title_fullStr | Data mining for important amino acid residues in multiple sequence alignments and protein structures von Jan-Oliver Janda |
title_full_unstemmed | Data mining for important amino acid residues in multiple sequence alignments and protein structures von Jan-Oliver Janda |
title_short | Data mining for important amino acid residues in multiple sequence alignments and protein structures |
title_sort | data mining for important amino acid residues in multiple sequence alignments and protein structures |
topic | Aminosäuren (DE-588)4142205-3 gnd Enzym (DE-588)4014988-2 gnd Strukturaufklärung (DE-588)4183788-5 gnd Molekulare Bioinformatik (DE-588)4531334-9 gnd |
topic_facet | Aminosäuren Enzym Strukturaufklärung Molekulare Bioinformatik Hochschulschrift |
url | http://epub.uni-regensburg.de/29907/ https://nbn-resolving.org/urn:nbn:de:bvb:355-epub-299076 http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=027292326&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
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